STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1121Magnetic particle membrane specific GTPase P16. (160 aa)    
Predicted Functional Partners:
amb4317
Hypothetical protein.
  
     0.726
amb0104
Lipid A core - O-antigen ligase and related enzyme.
  
     0.667
amb3935
Uncharacterized protein conserved in bacteria.
 
     0.648
amb0836
Hypothetical protein.
  
     0.633
amb0841
Poly-beta-hydroxybutyrate polymerase; phbC homolog.
 
  
 0.612
amb3188
Hypothetical protein.
  
     0.609
amb0026
Hypothetical protein RP420.
  
     0.608
amb3934
Uncharacterized protein conserved in bacteria.
  
     0.599
mms16
Magnetic particle membrane specific GTPase P16.
  
     0.586
clpS
ATP-dependent Clp protease adaptor protein clpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
       0.571
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.