STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1121Magnetic particle membrane specific GTPase P16. (160 aa)    
Predicted Functional Partners:
amb4317
Hypothetical protein.
  
     0.726
amb0104
Lipid A core - O-antigen ligase and related enzyme.
  
     0.667
amb3935
Uncharacterized protein conserved in bacteria.
 
     0.648
amb0836
Hypothetical protein.
  
     0.633
amb0841
Poly-beta-hydroxybutyrate polymerase; phbC homolog.
 
  
 0.625
amb3188
Hypothetical protein.
  
     0.609
amb0026
Hypothetical protein RP420.
  
     0.608
amb3934
Uncharacterized protein conserved in bacteria.
  
     0.599
mms16
Magnetic particle membrane specific GTPase P16.
  
     0.586
amb0321
Ribosomal protein L28.
  
     0.561
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.