STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1132Hypothetical protein. (651 aa)    
Predicted Functional Partners:
amb1134
Hypothetical protein.
   
 
 0.932
amb1133
Hypothetical protein.
       0.796
amb4443
Cell division protein.
 
 
 
 0.784
ftsE
Predicted ATPase involved in cell division; Part of the ABC transporter FtsEX involved in cellular division.
   
 
 0.715
amb4535
Zn-dependent protease with chaperone function.
  
 
 0.602
amb3238
N-acetylmuramoyl-L-alanine amidase.
   
 
 0.457
amb4081
N-acetylmuramoyl-L-alanine amidase.
   
 
 0.457
amb0024
TPR repeat protein.
 
 
   0.417
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.