Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb1160Modification methylase DpnIIB; Belongs to the N(4)/N(6)-methyltransferase family. (422 aa)    
Predicted Functional Partners:
amb1158
Site-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
  
 0.869
amb1159
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase/FAD synthetase and related enzyme.
  
  
 0.817
amb2724
Hypothetical protein.
 
     0.770
amb2721
Hypothetical protein.
 
  
 0.769
amb1930
Hypothetical protein.
 
  
 0.768
amb1169
Bacteriophage tail assembly protein.
   
 0.763
amb0368
Hypothetical protein.
 
 
 
 0.761
amb0372
Bacteriophage tail assembly protein.
   
 0.761
amb1936
Hypothetical protein.
 
     0.760
amb2720
Hypothetical protein.
 
     0.760
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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