STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1198Hypothetical protein. (117 aa)    
Predicted Functional Partners:
amb1195
Predicted transcriptional regulator.
       0.596
amb1196
Predicted transcriptional regulator.
       0.595
amb1197
Site-specific recombinase; DNA invertase Pin homolog.
       0.571
amb0602
Outer membrane protein and related peptidoglycan-associated protein.
   
    0.563
amb3018
Hypothetical protein.
   
    0.563
amb1200
Hypothetical protein.
       0.557
amb1201
Site-specific recombinase; DNA invertase Pin homolog.
       0.557
amb1199
Hypothetical protein.
       0.543
amb1202
Hypothetical protein.
       0.543
napA
Anaerobic dehydrogenase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
   
    0.400
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.