Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb1208Zn-dependent hydrolase; Including glyoxylase. (224 aa)    
Predicted Functional Partners:
amb2483
Lactoylglutathione lyase and related lyase.
 
 0.933
gloB
Zn-dependent hydrolase, including glyoxylase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
  
0.926
amb4132
FAD/FMN-containing dehydrogenase.
    
 0.917
amb2985
FAD/FMN-containing dehydrogenase.
    
 0.906
amb2206
Uncharacterized protein conserved in bacteria.
  
    0.746
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
  
 
 0.613
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
   
 0.584
amb1209
Predicted Rossmann fold nucleotide-binding protein.
       0.551
amb3466
Glutathione-regulated potassium-efflux system protein kefB; K+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.524
amb1042
CheY-like receiver.
    
 
 0.464
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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