STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1224Signal transduction histidine kinase. (549 aa)    
Predicted Functional Partners:
amb2979
FOG: CheY-like receiver.
 
 
 0.808
amb2643
FOG: CheY-like receiver.
 
   
 0.783
amb3470
FOG: CheY-like receiver.
 
   
 0.783
amb1431
CheY-like receiver.
 
   
 0.778
amb3537
Serine phosphatase RsbU, regulator of sigma subunit.
 
 
 
 0.555
amb1223
Hypothetical protein.
       0.538
amb1110
Signal transduction histidine kinase.
 
 
0.520
amb1432
Signal transduction histidine kinase.
 
 
0.513
amb2293
Signal transduction histidine kinase.
 
 
 
0.504
amb2930
Sensor protein barA.
 
 
0.504
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.