Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb1243Phenylacetyl CoA. (308 aa)    
Predicted Functional Partners:
amb1242
Fe-S-cluster-containing hydrogenase components 1.
 
 
 0.985
amb1241
Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.980
amb1245
Coenzyme F390 synthetase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
    
  0.928
amb2015
Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.917
amb2753
Uncharacterized protein; Possibly involved in aromatic compounds catabolism.
     
  0.900
amb2755
Coenzyme F390 synthetase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
     
  0.900
amb1240
Predicted thioesterase.
       0.773
amb1680
NADH dependant phenylglyoxylate.
  
 
 0.687
amb1679
NADH dependant phenylglyoxylate.
    
  0.660
amb1677
Pyruvate with ferredoxin oxidoreductase and related 2-oxoacid with ferredoxin oxidoreductase; Delta subunit.
    
  0.659
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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