Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| amb0308 | amb1244 | Acyl-CoA dehydrogenase. | Acyl-CoA synthetase. | 0.510 |
| amb0308 | amb1990 | Acyl-CoA dehydrogenase. | Pyruvate-flavodoxin oxidoreductase. | 0.546 |
| amb0879 | amb1244 | Uncharacterized conserved protein. | Acyl-CoA synthetase. | 0.514 |
| amb1240 | amb1241 | Predicted thioesterase. | Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.917 |
| amb1240 | amb1244 | Predicted thioesterase. | Acyl-CoA synthetase. | 0.646 |
| amb1240 | amb2015 | Predicted thioesterase. | Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.633 |
| amb1241 | amb1240 | Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Predicted thioesterase. | 0.917 |
| amb1241 | amb1244 | Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Acyl-CoA synthetase. | 0.795 |
| amb1241 | amb1678 | Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | NADH dependant phenylglyoxylate. | 0.860 |
| amb1241 | amb1990 | Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Pyruvate-flavodoxin oxidoreductase. | 0.533 |
| amb1241 | amb2015 | Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.902 |
| amb1241 | amb2145 | Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 627aa long 2-oxoacid--ferredoxin oxidoreductasealpha subunit. | 0.492 |
| amb1241 | amb2149 | Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.745 |
| amb1244 | amb0308 | Acyl-CoA synthetase. | Acyl-CoA dehydrogenase. | 0.510 |
| amb1244 | amb0879 | Acyl-CoA synthetase. | Uncharacterized conserved protein. | 0.514 |
| amb1244 | amb1240 | Acyl-CoA synthetase. | Predicted thioesterase. | 0.646 |
| amb1244 | amb1241 | Acyl-CoA synthetase. | Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.795 |
| amb1244 | amb1678 | Acyl-CoA synthetase. | NADH dependant phenylglyoxylate. | 0.554 |
| amb1244 | amb1990 | Acyl-CoA synthetase. | Pyruvate-flavodoxin oxidoreductase. | 0.671 |
| amb1244 | amb2015 | Acyl-CoA synthetase. | Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.651 |
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