STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1254Hypothetical protein. (168 aa)    
Predicted Functional Partners:
amb2145
627aa long 2-oxoacid--ferredoxin oxidoreductasealpha subunit.
 
  
 0.783
amb2146
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase, beta subunit.
 
     0.635
amb4143
Hypothetical protein.
  
    0.604
amb0148
Hypothetical protein.
  
    0.565
amb0285
Hypothetical protein RP006.
 
 
 
 0.548
amb1255
Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
     0.548
amb1253
Predicted permease.
       0.499
amb1210
Predicted membrane protein.
  
    0.486
amb1990
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.456
amb2140
B-subunit of benzoyl-CoA reductase.
  
     0.433
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.