Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb1291Hypothetical protein. (250 aa)    
Predicted Functional Partners:
amb2956
Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
 
     0.465
amb2954
Signal transduction histidine kinase.
 
     0.439
amb1048
Response regulator; Containing a CheY-like receiver domain and an HD-GYP domain.
 
     0.429
amb1292
ABC-type uncharacterized transport system; Permease component; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.425
amb1293
ABC-type uncharacterized transport system; Periplasmic component.
       0.425
amb1294
Cystathionine beta-lyase/cystathionine gamma-synthase.
       0.425
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.