Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
amb1300Cysteine synthase. (240 aa)    
Predicted Functional Partners:
amb1852
Serine acetyltransferase.
 
 0.983
amb3031
Serine acetyltransferase.
 
 0.981
amb1294
Cystathionine beta-lyase/cystathionine gamma-synthase.
  
 0.966
metZ
Cystathionine beta-lyase/cystathionine gamma-synthase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 0.965
amb1299
Rhodanese-related sulfurtransferase.
  
 
 0.953
cysC
NodQ bifunctional enzyme; Catalyzes the synthesis of activated sulfate.
  
  
 0.926
amb0199
Cysteine synthase.
  
  
 
0.921
amb3194
Phosphoserine aminotransferase.
  
 
 0.914
amb3367
Sulfite reductase, dissimilatory-type alpha subunit.
   
 
 0.907
amb3368
Sulfite reductase, dissimilatory-type beta subunit.
   
 
 0.907
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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