Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb1301Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homolog. (727 aa)    
Predicted Functional Partners:
amb1303
Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homolog.
 0.999
amb4195
Hypothetical protein.
 
 
 0.953
amb1482
Hypothetical protein.
     
  0.900
amb2022
Xanthine and CO dehydrogenase maturation factor; XdhC/CoxF family.
 
  
 0.785
amb2019
4-hydroxybenzoyl-CoA reductase gamma subunit.
 
 0.773
amb2882
Aerobic-type carbon monoxide dehydrogenase; Small subunit CoxS/CutS homolog.
 
 0.761
amb2880
Purine catabolism protein pucB.
 
   
 0.722
amb1483
Aldehyde oxidoreductase.
  
 
 0.634
amb1484
Aerobic-type carbon monoxide dehydrogenase; Middle subunit CoxM/CutM homolog.
  
 
 0.628
amb2021
4-hydroxybenzoyl-CoA reductase beta subunit.
  
 
 0.628
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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