Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
amb1320Predicted hydrolase or acyltransferase; Alpha/beta hydrolase superfamily. (301 aa)    
Predicted Functional Partners:
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
  
 
 0.687
amb1321
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.585
amb2906
Hypothetical protein.
  
  
 0.543
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.528
amb2634
Acyl-CoA dehydrogenase.
  
 0.505
amb2677
Dehydrogenase with different specificities; Related to short-chain alcohol dehydrogenase.
 
 0.486
amb3634
Predicted esterase of the alpha-beta hydrolase superfamily.
 
   
 0.467
amb0947
Hypothetical protein.
    
  0.443
amb4317
Hypothetical protein.
    
  0.443
amb0841
Poly-beta-hydroxybutyrate polymerase; phbC homolog.
 
  
 0.402
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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