STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1320Predicted hydrolase or acyltransferase; Alpha/beta hydrolase superfamily. (301 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.712
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
  
 
 0.683
amb1321
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.584
amb2906
Hypothetical protein.
  
  
 0.549
amb2634
Acyl-CoA dehydrogenase.
  
 0.485
amb3634
Predicted esterase of the alpha-beta hydrolase superfamily.
 
   
 0.483
amb0947
Hypothetical protein.
    
 0.467
amb4317
Hypothetical protein.
    
 0.467
amb2677
Dehydrogenase with different specificities; Related to short-chain alcohol dehydrogenase.
 
 
 0.414
amb0841
Poly-beta-hydroxybutyrate polymerase; phbC homolog.
 
  
 0.406
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.