STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1339Hypothetical protein. (111 aa)    
Predicted Functional Partners:
amb1338
Hypothetical protein.
       0.762
amb1536
Uncharacterized conserved protein.
  
     0.659
amb3895
Predicted hydrolase; HAD superfamily.
  
     0.592
amb1340
Hypothetical protein.
       0.588
amb3341
Uncharacterized protein conserved in bacteria; Belongs to the UPF0262 family.
  
     0.572
amb2071
Predicted hydrolase of HD superfamily.
  
     0.562
amb1270
Probable intracellular septation protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
 
     0.547
amb1358
Uncharacterized protein; Related to arylsulfate sulfotransferase involved in siderophore biosynthesis.
 
    0.519
amb4405
Hypothetical protein.
  
     0.513
amb4404
Universal stress protein UspA and related nucleotide-binding protein.
  
     0.470
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.