Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| amb0017 | amb0026 | amb0017 | amb0026 | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein RP420. | 0.691 |
| amb0017 | amb0836 | amb0017 | amb0836 | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein. | 0.657 |
| amb0017 | amb1342 | amb0017 | amb1342 | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Uncharacterized protein; Conserved in bacteria. | 0.493 |
| amb0017 | amb1343 | amb0017 | amb1343 | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | WD40-like repeat. | 0.629 |
| amb0017 | amb3716 | amb0017 | amb3716 | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Parvulin-like peptidyl-prolyl isomerase. | 0.441 |
| amb0017 | bamA | amb0017 | amb2490 | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein/protective antigen OMA87; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.671 |
| amb0017 | bamD | amb0017 | amb3856 | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | DNA uptake lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.539 |
| amb0026 | amb0017 | amb0026 | amb0017 | Hypothetical protein RP420. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.691 |
| amb0026 | amb0836 | amb0026 | amb0836 | Hypothetical protein RP420. | Hypothetical protein. | 0.775 |
| amb0026 | amb1343 | amb0026 | amb1343 | Hypothetical protein RP420. | WD40-like repeat. | 0.771 |
| amb0026 | amb2819 | amb0026 | amb2819 | Hypothetical protein RP420. | Uncharacterized conserved protein. | 0.704 |
| amb0026 | amb3716 | amb0026 | amb3716 | Hypothetical protein RP420. | Parvulin-like peptidyl-prolyl isomerase. | 0.731 |
| amb0026 | bamA | amb0026 | amb2490 | Hypothetical protein RP420. | Outer membrane protein/protective antigen OMA87; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.478 |
| amb0026 | bamD | amb0026 | amb3856 | Hypothetical protein RP420. | DNA uptake lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.416 |
| amb0836 | amb0017 | amb0836 | amb0017 | Hypothetical protein. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.657 |
| amb0836 | amb0026 | amb0836 | amb0026 | Hypothetical protein. | Hypothetical protein RP420. | 0.775 |
| amb0836 | amb1343 | amb0836 | amb1343 | Hypothetical protein. | WD40-like repeat. | 0.696 |
| amb0836 | amb2819 | amb0836 | amb2819 | Hypothetical protein. | Uncharacterized conserved protein. | 0.538 |
| amb0836 | amb3716 | amb0836 | amb3716 | Hypothetical protein. | Parvulin-like peptidyl-prolyl isomerase. | 0.704 |
| amb1342 | amb0017 | amb1342 | amb0017 | Uncharacterized protein; Conserved in bacteria. | Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.493 |
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