Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
amb1356Predicted signal transduction protein; Containing a membrane domain, an EAL and a GGDEF domain. (916 aa)    
Predicted Functional Partners:
amb4321
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
 
 
0.799
amb1918
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
 
 
0.798
amb1355
ABC-type uncharacterized transport system; Periplasmic component.
       0.782
amb1106
EAL domain.
 
 
 0.774
amb1281
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
 
 
0.761
amb1432
Signal transduction histidine kinase.
  
 
 0.715
amb1110
Signal transduction histidine kinase.
  
 
 0.713
amb0650
Predicted periplasmic ligand-binding sensor domain.
  
 
 0.709
amb1841
Hypothetical protein.
  
 
 0.709
amb3438
Sensor protein gacS.
  
 
 0.709
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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