STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1361Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (204 aa)    
Predicted Functional Partners:
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
 
 0.995
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
     
 0.906
amb2108
3-oxoacyl-(acyl-carrier-protein) synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
  
 0.867
amb2105
S-malonyltransferase.
  
  
 0.834
amb1360
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
     0.815
amb1359
Hypothetical protein.
  
  
 0.813
amb1591
Enoyl-acyl-carrier-protein reductase.
  
    0.776
amb4226
Enoyl-[acyl-carrier-protein] reductase.
  
    0.776
amb1358
Uncharacterized protein; Related to arylsulfate sulfotransferase involved in siderophore biosynthesis.
       0.773
amb1362
TPR repeat SEL1 subfamily.
       0.557
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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