Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
amb1378Hemerythrin-like protein PA1673. (169 aa)    
Predicted Functional Partners:
amb0871
Hypothetical protein.
  
     0.775
amb2239
Hemerythrin-like protein PA1673.
  
     0.775
amb2654
Hemerythrin-like protein PA1673.
  
     0.775
amb2739
Hemerythrin.
  
     0.775
amb4136
Hemerythrin-like protein RSc0777.
  
     0.774
amb1379
Pentose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
       0.773
amb2800
Hemerythrin-like protein PA1673.
  
     0.773
amb4265
Hypothetical protein.
  
     0.773
amb1987
Hypothetical protein.
  
     0.736
amb1380
Fructose/tagatose bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
   
   0.569
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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