Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb1403Transcriptional regulator. (192 aa)    
Predicted Functional Partners:
amb1404
Transcriptional regulator.
    
0.983
amb1407
Transcriptional regulator.
   
0.983
amb1401
Cytochrome c, mono- and diheme variants.
 
  
 0.980
amb1402
NirF protein.
 
  
 0.978
amb1408
Nitrite reductase precursor.
 
  
 0.936
amb1405
Transcriptional regulator.
 
  
0.921
amb1400
Uroporphyrinogen-III methylase.
  
    0.817
amb1399
Plastocyanin precursor.
 
     0.809
amb1395
Nitrite reductase precursor.
 
  
 0.800
amb4165
Nitrite reductase precursor.
 
  
 0.798
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.