Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb1438Glycosyltransferase. (387 aa)    
Predicted Functional Partners:
amb1437
Nucleoside-diphosphate-sugar epimerase.
 
    0.835
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.627
amb1436
Hypothetical protein.
  
  
 0.538
amb1445
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.525
amb1444
Glycosyltransferase.
  
     0.506
amb1446
Sugar transferase involved in lipopolysaccharide synthesis.
 
  
 0.502
amb3062
Glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.493
amb0124
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme.
 
  
 0.492
amb0101
Glycosyltransferase.
  
     0.471
amb1450
Succinoglycan biosynthesis transport protein exoP.
 
  
 0.470
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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