Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb1448Uncharacterized protein; Conserved in bacteria. (427 aa)    
Predicted Functional Partners:
amb1450
Succinoglycan biosynthesis transport protein exoP.
 
   
 0.728
amb3041
Uncharacterized protein conserved in bacteria.
  
     0.717
amb3742
Type IV pili component.
  
     0.622
amb1447
Hypothetical protein.
       0.608
amb0302
Skin secretory protein xP2 precursor.
  
     0.600
amb3465
Predicted protein tyrosine phosphatase.
  
     0.545
amb1454
Lipid A core - O-antigen ligase and related enzyme.
 
     0.534
amb3407
Uncharacterized protein involved in outer membrane biogenesis.
  
     0.508
amb1445
Membrane protein involved in the export of O-antigen and teichoic acid.
       0.453
amb1446
Sugar transferase involved in lipopolysaccharide synthesis.
       0.453
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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