Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb1453Hypothetical protein. (303 aa)    
Predicted Functional Partners:
amb1455
Flavonol 3-sulfotransferase.
 
     0.931
amb1452
Hypothetical protein.
 
     0.907
amb1463
Hypothetical protein.
 
     0.818
amb1464
Hypothetical protein.
 
     0.785
amb1454
Lipid A core - O-antigen ligase and related enzyme.
       0.580
amb1990
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.560
lgt
Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
 
  
 0.556
amb1465
ABC-type multidrug transport system; ATPase and permease component.
 
     0.549
amb1457
Histone acetyltransferase HPA2 and related acetyltransferase.
 
     0.543
amb1462
Asparagine synthase.
 
   
 0.536
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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