Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
amb1457Histone acetyltransferase HPA2 and related acetyltransferase. (177 aa)    
Predicted Functional Partners:
amb1458
Microcystin-dependent protein.
 
     0.950
amb1459
Microcystin-dependent protein.
 
     0.942
amb1460
Microcystin-dependent protein.
 
     0.931
amb1456
Hypothetical protein.
       0.658
amb1463
Hypothetical protein.
 
     0.574
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
 
   
 0.557
amb1464
Hypothetical protein.
 
     0.556
amb1453
Hypothetical protein.
 
     0.543
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.427
amb4153
Chemotaxis protein CheC; Inhibitor of MCP methylation.
  
 
   0.425
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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