STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1459Microcystin-dependent protein. (192 aa)    
Predicted Functional Partners:
amb1457
Histone acetyltransferase HPA2 and related acetyltransferase.
 
     0.942
amb1458
Microcystin-dependent protein.
 
    
0.803
amb1460
Microcystin-dependent protein.
 
    
0.766
amb1456
Hypothetical protein.
       0.632
amb1139
Autotransporter adhesin.
 
     0.600
amb3275
RTX toxins and related Ca2+-binding protein.
 
     0.507
amb1463
Hypothetical protein.
 
     0.480
amb1361
Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
     0.473
amb1453
Hypothetical protein.
  
     0.439
amb1464
Hypothetical protein.
 
     0.439
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.