STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1466Predicted ATPase. (2123 aa)    
Predicted Functional Partners:
amb3329
Hypothetical 1041 kDa protein in hypE 3'region.
 
 0.979
amb1432
Signal transduction histidine kinase.
 
 
 0.964
amb3654
Hypothetical 1041 kDa protein in hypE 3'region.
 
 
 0.964
amb2932
Methylase of chemotaxis methyl-accepting protein.
 
 
 0.953
amb3450
Signal transduction histidine kinase.
 
 0.952
amb2930
Sensor protein barA.
  
 
0.947
amb3878
Sensor protein gacS.
 
 0.944
amb1956
Signal transduction histidine kinase.
 
 
 0.940
amb3438
Sensor protein gacS.
 
 0.934
amb1110
Signal transduction histidine kinase.
 
 
 0.933
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.