STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1495Hypothetical protein. (117 aa)    
Predicted Functional Partners:
amb1494
Retron-type reverse transcriptase.
       0.781
amb1496
Hypothetical protein.
       0.610
amb1497
Hypothetical protein.
       0.484
amb1498
Hypothetical protein.
       0.471
amb1499
Single-stranded DNA-binding protein.
       0.471
amb1500
Hypothetical protein.
       0.471
amb1501
Hypothetical protein.
       0.471
amb1502
Predicted transcriptional regulator; Belongs to the ParB family.
       0.471
amb1493
Hypothetical protein.
       0.451
amb1491
Integrase; Site-specific recombinase XerD.
       0.415
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.