Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb1528Hypothetical protein Rv2004c/MT2060/Mb2027c. (511 aa)    
Predicted Functional Partners:
dcd
Deoxycytidine deaminase; Catalyzes the deamination of dCTP to dUTP.
       0.773
amb0158
Predicted phosphatase/phosphohexomutase.
  
    0.723
amb0790
CbbY protein.
  
    0.723
amb3888
Cation transport ATPase.
 
    0.722
amb3665
Signal transduction histidine kinase.
  
  
 0.710
amb1529
Universal stress protein UspA and related nucleotide-binding protein.
  
  
 0.680
amb2746
Ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
    0.642
amb4446
Ribonucleotide reductase, alpha subunit; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
    0.642
amb1216
Putative carboxymethylenebutenolidase.
  
  
 0.606
amb3253
Hypothetical protein.
  
  
 0.606
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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