Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb1533Disulfide bond formation protein DsbB. (159 aa)    
Predicted Functional Partners:
coq7
Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
 
     0.855
amb3928
Antifreeze glycopeptide polyprotein precursor.
 
 
 0.707
amb1392
Protein-disulfide isomerase.
 
 
 0.693
amb3982
Protein-disulfide isomerase.
 
 
 0.682
amb4404
Universal stress protein UspA and related nucleotide-binding protein.
  
     0.601
amb2261
Recombinational DNA repair protein; RecF pathway.
  
   
 0.586
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.563
amb4543
Uncharacterized protein; Conserved in bacteria.
  
     0.556
amb4397
Serine kinase of the HPr protein, regulates carbohydrate metabolism.
  
     0.549
amb1534
Putative periplasmic protein kinase ArgK and related GTPase of G3E family.
       0.540
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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