Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
amb1545Predicted membrane protein. (118 aa)    
Predicted Functional Partners:
amb1546
Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.980
amb2727
Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.915
amb2626
Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.914
amb4333
Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.914
amb1544
Predicted signal-transduction protein containing cAMP-binding and CBS domains.
  
  
 0.603
amb0580
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
  
 0.432
amb1422
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
  
 0.432
amb1551
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
  
 0.432
amb2262
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
  
 0.432
amb2304
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
  
 0.432
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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