STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1580Hypothetical protein. (290 aa)    
Predicted Functional Partners:
amb1581
Protein fixU homolog.
 
    0.978
amb1582
Putative nifZ protein.
 
    0.961
amb1579
Ferredoxin V.
 
    0.923
amb1583
FeMo cofactor biosynthesis protein nifB.
 
    0.897
amb1566
Hypothetical 175 kDa protein in nifX 3'region.
 
  
 0.852
amb1561
Nitrogenase stabilizing/protective protein nifW.
 
    0.834
amb1569
Nitrogenase molybdenum-iron protein alpha and beta chains; Belongs to the NifD/NifK/NifE/NifN family.
  
    0.797
amb1564
NifQ protein.
 
    0.795
amb1567
NifX protein.
 
    0.791
amb3580
Hypothetical 77 kDa protein in fixX 3'region.
  
    0.791
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.