STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1607Predicted amidohydrolase. (275 aa)    
Predicted Functional Partners:
amb1606
Glutaredoxin and related protein; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
 
 
 
 0.884
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
 
 0.534
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
     
 0.507
amb2341
Riboflavin biosynthesis protein ribD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.471
amb2930
Sensor protein barA.
  
 
 0.458
amb0040
Related Zn-dependent dehydrogenase.
  
 
 0.436
amb1100
Arginase/agmatinase/formimionoglutamate hydrolase; Arginase family; Belongs to the arginase family.
  
 0.430
amb1817
Uncharacterized NAD(FAD)-dependent dehydrogenase.
   
  
 0.427
amb2173
Uncharacterized NAD(FAD)-dependent dehydrogenase.
   
  
 0.427
amb3878
Sensor protein gacS.
  
 
 0.405
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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