STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1614Signal transduction protein containing GAF and PtsI domains; Belongs to the PEP-utilizing enzyme family. (758 aa)    
Predicted Functional Partners:
amb4394
Phosphotransferase system, HPr-related protein.
  
 
 
 0.945
amb3938
Phosphotransferase system mannitol/fructose-specific IIA domain; Ntr-type.
  
   
 0.812
amb4395
Phosphotransferase system, mannose/fructose-specific component IIA.
  
   
 0.721
amb1615
Uncharacterized protein; Conserved in bacteria.
       0.708
amb1613
Putative 2-nitropropane dioxygenase.
       0.625
amb1612
Aspartokinase; Belongs to the aspartokinase family.
     
 0.614
ispG
Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
       0.608
amb3665
Signal transduction histidine kinase.
  
  
 0.529
ubiG
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
       0.508
amb3341
Uncharacterized protein conserved in bacteria; Belongs to the UPF0262 family.
  
     0.427
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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