STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1637Hypothetical protein. (87 aa)    
Predicted Functional Partners:
amb1638
Hypothetical protein.
 
     0.951
amb1635
Probable sensor protein hoxX; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.775
amb1636
Hydrogenase expression/formation protein hypE.
       0.773
amb1639
Hydrogenase expression/formation protein hypD2; Belongs to the HypD family.
       0.773
amb1640
Hydrogenase maturation factor.
       0.773
amb1641
Hydrogenase maturation protein hypF1.
       0.718
amb1642
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase.
       0.718
hypA
Hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
       0.718
amb1644
Ni,Fe-hydrogenase I large subunit.
       0.718
amb1645
Hydrogenase maturation factor.
       0.718
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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