Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb1648Polysulphide reductase. (401 aa)    
Predicted Functional Partners:
amb1649
Fe-S-cluster-containing hydrogenase components 1.
 
 0.983
amb1650
Ni,Fe-hydrogenase I small subunit.
 
  
 0.958
amb1647
Ni,Fe-hydrogenase I large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.948
amb1646
Ni,Fe-hydrogenase maturation factor.
 
  
 0.899
amb1645
Hydrogenase maturation factor.
 
  
 0.770
amb2015
Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.770
amb1241
Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.755
amb2921
Fe-S-cluster-containing hydrogenase components 2.
 
 
 0.744
amb1242
Fe-S-cluster-containing hydrogenase components 1.
 
 
 0.736
amb2689
Ferredoxin.
 
 
 0.724
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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