STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1658Septum formation initiator. (88 aa)    
Predicted Functional Partners:
ftsQ
Cell division septal protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
 
 
 
 0.916
amb3839
Protein mraZ; Belongs to the MraZ family.
 
  
 0.727
amb0501
FlbE protein.
  
     0.699
amb2528
Periplasmic protein TonB, links inner and outer membranes.
 
 
 
 0.688
amb4444
Uncharacterized conserved protein.
 
     0.669
amb3847
Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 
 
 0.636
amb3841
Periplasmic protein TonB; Links inner and outer membranes.
  
     0.590
amb0194
Uncharacterized protein; Conserved in bacteria.
  
     0.587
lptD
Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
    0.583
amb3823
Flagellar assembly protein fliX.
  
     0.557
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.