STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1738Hypothetical protein. (233 aa)    
Predicted Functional Partners:
amb1739
Mu-like prophage I protein.
       0.773
amb1740
Mu-like prophage major head subunit gpT.
       0.773
amb1741
Phage-related minor tail protein.
       0.752
amb1742
Hypothetical protein.
       0.752
amb1743
Hypothetical protein.
       0.752
amb1744
Hypothetical protein.
       0.752
amb1745
Hypothetical protein.
       0.752
amb1746
Predicted transcriptional regulator.
       0.552
amb1737
Hypothetical protein.
       0.531
amb1747
Hypothetical protein.
       0.440
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.