Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
amb1804ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (415 aa)    
Predicted Functional Partners:
amb1805
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
amb1803
ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.994
amb1802
ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.990
amb1673
ABC-type branched-chain amino acid transport systems; ATPase component.
  
 0.981
amb2026
ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.979
amb2457
ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.978
amb1674
ABC-type branched-chain amino acid transport systems; ATPase component.
  
 0.977
amb2027
ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.969
amb2458
ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.968
amb3590
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
  
 0.966
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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