STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1809Uncharacterized protein conserved in bacteria. (374 aa)    
Predicted Functional Partners:
amb1808
Predicted transcriptional regulator.
       0.661
amb1810
Copper chaperone.
       0.631
amb1807
Cation transport ATPase.
       0.619
amb0304
Membrane-bound metallopeptidase.
 
   
 0.568
amb1806
Methyl-accepting chemotaxis protein.
       0.478
amb3503
Hypothetical protein.
  
     0.478
amb3823
Flagellar assembly protein fliX.
  
     0.466
amb3825
Chemotactic signal-response protein cheL.
 
     0.439
amb0506
Flagellar hook-length control protein.
  
     0.431
amb0902
Membrane protein; Related to metalloendopeptidase.
  
   
 0.415
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (12%) [HD]