Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb1815Uncharacterized conserved protein. (133 aa)    
Predicted Functional Partners:
amb1816
Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
  
  
 0.808
amb1817
Uncharacterized NAD(FAD)-dependent dehydrogenase.
  
    0.489
amb1818
Hypothetical protein.
       0.456
amb0858
Predicted redox protein; Regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
  
  
 0.429
amb4458
Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
  
  
 0.429
amb1814
Parvulin-like peptidyl-prolyl isomerase.
       0.428
trpE
Anthranilate/para-aminobenzoate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismat [...]
       0.425
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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