STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1828Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (166 aa)    
Predicted Functional Partners:
amb1831
Arsenate reductase and related protein; Glutaredoxin family.
 
  
 0.968
amb1830
Arsenite efflux pump ACR3 and related permease.
 
  
 0.947
amb1827
Predicted transcriptional regulator.
 
  
 0.891
amb1829
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
    
0.755
amb1832
Arsenical resistance operon trans-acting repressor arsD.
     
 0.747
amb1833
Oxyanion-translocating ATPase; Anion-transporting ATPase; Belongs to the arsA ATPase family.
     
 0.746
amb3340
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
     0.733
amb1826
Signal transduction histidine kinase.
  
    0.730
amb1825
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
       0.723
amb1450
Succinoglycan biosynthesis transport protein exoP.
  
 
 0.660
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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