STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1833Oxyanion-translocating ATPase; Anion-transporting ATPase; Belongs to the arsA ATPase family. (568 aa)    
Predicted Functional Partners:
amb1832
Arsenical resistance operon trans-acting repressor arsD.
   
 0.985
amb1831
Arsenate reductase and related protein; Glutaredoxin family.
    
 0.892
amb1829
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.881
amb1827
Predicted transcriptional regulator.
 
   
 0.818
amb1830
Arsenite efflux pump ACR3 and related permease.
     
 0.813
amb1828
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.746
pyrF
Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
    
 
 0.679
amb1825
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
       0.660
amb1826
Signal transduction histidine kinase.
       0.660
amb1577
Hypothetical 157 kDa protein in draG 3'region; Belongs to the ArsC family.
    
 0.578
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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