STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1842Beta-glucosidase-related glycosidase. (401 aa)    
Predicted Functional Partners:
amb4248
Predicted phosphotransferase related to Ser/Thr protein kinase.
 
  
 0.931
amb1841
Hypothetical protein.
  
  
 0.800
amb1843
Inner membrane protein involved in colicin E2 resistance.
     
 0.789
amb1839
Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
       0.773
amb1840
Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
       0.773
amb3733
Beta-lactamase class C and other penicillin binding protein.
 
  
 0.705
amb4492
Kinesin-like protein K39.
  
  
 0.683
anmK
Predicted molecular chaperone distantly related to HSP70-fold metalloprotease; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
   
 0.666
amb4488
Permease of the major facilitator superfamily.
 
   
 0.559
amb1844
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.489
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.