STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1854ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (305 aa)    
Predicted Functional Partners:
amb1855
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
 0.988
amb1859
ABC-type nitrate/sulfonate/bicarbonate transport system; Permease component.
  
 0.977
amb1858
ABC-type nitrate/sulfonate/bicarbonate transport system; ATPase component.
  
 0.962
amb1864
ABC-type nitrate/sulfonate/bicarbonate transport system; Permease component.
  
 0.949
amb1865
ABC-type nitrate/sulfonate/bicarbonate transport system; ATPase component.
  
 0.849
amb1856
Putative protein-tyrosine sulfotransferase.
 
     0.820
amb1860
ABC-type nitrate/sulfonate/bicarbonate transport systems; Periplasmic components.
 
    
0.816
amb1857
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
     
 0.749
amb1056
Succinate dehydrogenase/fumarate reductase; Flavoprotein subunit.
 
    0.715
amb1863
ABC-type nitrate/sulfonate/bicarbonate transport systems; Periplasmic components.
 
     0.702
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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