STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1864ABC-type nitrate/sulfonate/bicarbonate transport system; Permease component. (255 aa)    
Predicted Functional Partners:
amb1865
ABC-type nitrate/sulfonate/bicarbonate transport system; ATPase component.
  
 0.978
amb1863
ABC-type nitrate/sulfonate/bicarbonate transport systems; Periplasmic components.
 
  
 0.969
amb1854
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
 0.949
amb1858
ABC-type nitrate/sulfonate/bicarbonate transport system; ATPase component.
  
 0.939
amb1860
ABC-type nitrate/sulfonate/bicarbonate transport systems; Periplasmic components.
 
  
 0.879
amb1324
ABC-type nitrate/sulfonate/bicarbonate transport system; ATPase component.
  
 0.783
amb1866
Putative intracellular protease/amidase.
       0.773
amb0534
ABC-type nitrate/sulfonate/bicarbonate transport systems; Periplasmic component.
 
  
 0.704
amb0535
ATPase components of various ABC-type transport systems; Contain duplicated ATPase.
  
 0.679
amb1862
Hypothetical protein.
  
    0.611
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.