Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb1866Putative intracellular protease/amidase. (221 aa)    
Predicted Functional Partners:
amb1863
ABC-type nitrate/sulfonate/bicarbonate transport systems; Periplasmic components.
       0.773
amb1864
ABC-type nitrate/sulfonate/bicarbonate transport system; Permease component.
       0.773
amb1865
ABC-type nitrate/sulfonate/bicarbonate transport system; ATPase component.
       0.773
amb1862
Hypothetical protein.
       0.511
amb1861
Hypothetical protein.
       0.507
amb1860
ABC-type nitrate/sulfonate/bicarbonate transport systems; Periplasmic components.
 
     0.475
amb2067
SOS-response transcriptional repressors; Belongs to the peptidase S24 family.
   
 
 0.452
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
   
 
 0.452
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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