Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
amb1248 | amb1874 | Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein. | 0.432 |
amb1248 | amb1876 | Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.738 |
amb1248 | amb2315 | Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein. | 0.440 |
amb1248 | amb3431 | Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein. | 0.640 |
amb1874 | amb1248 | Outer membrane protein. | Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.432 |
amb1874 | amb1875 | Outer membrane protein. | Cation/multidrug efflux pump. | 0.989 |
amb1874 | amb1876 | Outer membrane protein. | Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.932 |
amb1874 | amb3412 | Outer membrane protein. | Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.721 |
amb1874 | amb3425 | Outer membrane protein. | Cation/multidrug efflux pump. | 0.952 |
amb1874 | amb3433 | Outer membrane protein. | Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.664 |
amb1874 | amb3434 | Outer membrane protein. | Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.700 |
amb1874 | amb3998 | Outer membrane protein. | Multidrug resistance efflux pump. | 0.831 |
amb1875 | amb1874 | Cation/multidrug efflux pump. | Outer membrane protein. | 0.989 |
amb1875 | amb1876 | Cation/multidrug efflux pump. | Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.954 |
amb1875 | amb2315 | Cation/multidrug efflux pump. | Outer membrane protein. | 0.884 |
amb1875 | amb3431 | Cation/multidrug efflux pump. | Outer membrane protein. | 0.944 |
amb1875 | amb3998 | Cation/multidrug efflux pump. | Multidrug resistance efflux pump. | 0.534 |
amb1876 | amb1248 | Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.738 |
amb1876 | amb1874 | Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Outer membrane protein. | 0.932 |
amb1876 | amb1875 | Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Cation/multidrug efflux pump. | 0.954 |
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