Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb1926Phage-related minor tail protein. (733 aa)    
Predicted Functional Partners:
amb1929
Hypothetical protein.
     
 0.780
amb1930
Hypothetical protein.
       0.780
amb1927
Hypothetical protein.
       0.773
amb1928
Hypothetical protein.
       0.773
amb4492
Kinesin-like protein K39.
   
   0.764
amb1974
Hypothetical protein.
    
   0.676
amb2528
Periplasmic protein TonB, links inner and outer membranes.
    
   0.676
amb1931
Hypothetical protein.
  
  
 0.581
amb1771
Hypothetical protein.
  
    0.548
amb1891
Phage protein D.
  
  
 0.522
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.