STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1930Hypothetical protein. (516 aa)    
Predicted Functional Partners:
amb1936
Hypothetical protein.
 
     0.861
amb1937
Hypothetical protein.
 
     0.855
amb2720
Hypothetical protein.
 
     0.782
amb1926
Phage-related minor tail protein.
       0.781
amb1929
Hypothetical protein.
       0.780
amb1927
Hypothetical protein.
       0.773
amb1928
Hypothetical protein.
       0.773
amb1160
Modification methylase DpnIIB; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.772
amb0363
Modification methylase DpnIIB; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.771
amb2724
Hypothetical protein.
  
     0.768
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.