STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1936Hypothetical protein. (397 aa)    
Predicted Functional Partners:
amb1937
Hypothetical protein.
 
     0.934
amb1930
Hypothetical protein.
 
     0.861
amb2721
Hypothetical protein.
 
     0.782
amb1933
Holliday junction resolvase.
       0.781
amb1932
Hypothetical protein.
       0.773
amb1934
Hypothetical protein.
       0.773
amb1935
Hypothetical protein.
       0.773
amb2724
Hypothetical protein.
  
     0.767
amb1160
Modification methylase DpnIIB; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.764
amb0363
Modification methylase DpnIIB; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.763
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.