Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
amb1947Predicted ATPase. (1959 aa)    
Predicted Functional Partners:
amb3329
Hypothetical 1041 kDa protein in hypE 3'region.
 
 
 0.965
amb3654
Hypothetical 1041 kDa protein in hypE 3'region.
 
 
 0.965
amb2932
Methylase of chemotaxis methyl-accepting protein.
 
 
 0.957
amb1946
Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
 
 0.955
amb3450
Signal transduction histidine kinase.
 
 
 0.953
amb1956
Signal transduction histidine kinase.
 
 
 0.949
amb3291
Signal transduction histidine kinase.
 
  
 0.930
amb1967
Signal transduction histidine kinase.
 
 
 0.926
amb2282
Uptake hydrogenase.
 
 
 0.922
amb1945
Response regulator; Containing a CheY-like receiver domain and a GGDEF domain.
 
 
 0.914
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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